- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PFC1
Description : rRNA adenosine dimethylase *(PFC) & original description: none
Gene families : OG0006692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006692_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g15419 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g00823 | PFC1 | rRNA adenosine dimethylase *(PFC) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.30G050300.1 | PFC1, Ceric.30G050300 | rRNA adenosine dimethylase *(PFC) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05363 | PFC1 | rRNA adenosine dimethylase *(PFC) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01027529001 | PFC1 | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g20981 | PFC1 | rRNA adenosine dimethylase *(PFC) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g42594 | PFC1 | rRNA adenosine dimethylase *(PFC) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0042586 | peptide deformylase activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001737 | KsgA/Erm | 72 | 340 |
| No external refs found! |