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  5. Dac_g15238

Dac_g15238 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g15238

Target Alias Description ECC score Gene Family Method Actions
Adi_g056852 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05949 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60507.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60509.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04759 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09015 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009728001 TLP6, AtTLP6 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
GSVIVT01010999001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029701001 TLP10, AtTLP10 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
Gb_21935 TLP10, AtTLP10 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64700.2 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47640.1 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
MA_132704g0010 AtTLP3, TLP3 transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Ore_g32411 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14941 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 65 111
IPR000007 Tubby_C 126 421
No external refs found!