LOC_Os07g37010.1


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0010948 (LandPlants) Phylogenetic Tree(s): OG_02_0010948_tree ,
OG_03_0010916 (SeedPlants) Phylogenetic Tree(s): OG_03_0010916_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g37010.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00148150 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AMTR_s00088p00097010 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.05 Archaeplastida
AT3G50070 CYCD3;3 CYCLIN D3;3 0.03 Archaeplastida
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.07 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.06 Archaeplastida
GSVIVT01000125001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
GSVIVT01000226001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
GSVIVT01003674001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 Archaeplastida
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
Gb_03361 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.04 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.05 Archaeplastida
MA_94639g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
Smo15078 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
Solyc02g064900.3.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Solyc05g006050.3.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.1 Archaeplastida
Zm00001e018000_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.1 Archaeplastida
Zm00001e034405_P005 No alias cyclin (CYCD) 0.04 Archaeplastida
Zm00001e035575_P002 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e038767_P002 No alias no hits & (original description: none) 0.06 Archaeplastida
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 LandPlants
GSVIVT01003674001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 LandPlants
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.03 LandPlants
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.03 LandPlants
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 55 157
IPR004367 Cyclin_C-dom 160 257
No external refs found!