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  5. LOC_Os07g36450.1

LOC_Os07g36450.1


Description : THA8 plastidial RNA splicing factor


Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0002392 (SeedPlants) Phylogenetic Tree(s): OG_03_0002392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g36450.1
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00175980 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g48730,... 0.03 Archaeplastida
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01032162001 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.03 Archaeplastida
Pp3c6_14920V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
Smo119487 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.03 Archaeplastida
Smo416782 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.03 Archaeplastida
Solyc09g092360.3.1 No alias THA8 plastidial RNA splicing factor 0.03 Archaeplastida
Pp3c6_14920V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 LandPlants
Smo416782 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.02 LandPlants
Solyc09g092360.3.1 No alias THA8 plastidial RNA splicing factor 0.03 LandPlants
Solyc09g092360.3.1 No alias THA8 plastidial RNA splicing factor 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 146 194
No external refs found!