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Aliases : PCFS4
Description : component *(Pcf11) of Cleavage Factor II (CF-IIm) complex & original description: none
Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00210200 | evm_27.TU.AmTr_v1... | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g028535 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g10884 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11854 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04503 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13602 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g77134 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G047300.1 | Ceric.04G047300 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G037600.1 | Ceric.20G037600 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000396.26 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g09800 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033783001 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g11409 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g16594 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g18940.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47532 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08557 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43016 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57483 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12428 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g009120.4.1 | Solyc09g009120 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04862 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05766 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06139 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e009485_P001 | Zm00001e009485 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021648_P002 | PCFS4, Zm00001e021648 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003352 | regulation of cilium movement | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0032886 | regulation of microtubule-based process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0060632 | regulation of microtubule-based movement | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006569 | CID_dom | 535 | 633 |
| No external refs found! |