Aliases : ATCNGC9, CNGC9
Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Dac_g14388 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g13140 | CNGC7, ATCNGC7 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g55080.1 | ATCNGC6, CNGC6,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g24602 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g02834 | ATCNGC14, CNGC14 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11777 | ATCNGC9, CNGC9 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g52371 | CNGC5, ATCNGC5 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo113786 | ATCNGC9, CNGC9 | Solute transport.channels.VIC superfamily.cyclic... | 0.03 | OrthoFinder output from all 47 species | |
Smo266514 | CNGC15, ATCNGC15 | Solute transport.channels.VIC superfamily.cyclic... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g007260.3.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006772_P003 | CNGC5, ATCNGC5,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016004_P001 | ATCNGC20,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | IEA | Interproscan |
BP | GO:0006811 | monoatomic ion transport | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005821 | Ion_trans_dom | 101 | 423 |
No external refs found! |