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  5. Dac_g13520

Dac_g13520 (PAT1)


Aliases : PAT1

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g13520
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Dde_g03424 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40278 SCL5 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Msp_g10420 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13918 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11765 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55042 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063940.2.1 PAT1, Solyc07g063940 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Spa_g12920 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 238 606
No external refs found!