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Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g13479 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G14200 | No alias | RING/U-box superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT1G26800 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085324 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05540 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g43740.1 | LOC_Os07g43740 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00999 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24681 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g007895.1.1 | Solyc05g007895 | E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g075910.1.1 | RHC1A, Solyc08g075910 | Probable E3 ubiquitin-protein ligase RHC1A... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00982 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e010857_P001 | Zm00001e010857 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 296 | 338 |
| No external refs found! |