Dac_g13418

Description : Met-tRNA positioning component *(eIF5B) of initiator tRNA carrier complex & original description: none

Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g13418

Target	Alias	Description	ECC score	Gene Family Method
AT1G76720	No alias	eukaryotic translation initiation factor 2 (eIF-2) family protein	0.02	OrthoFinder output from all 47 species
AT2G27700	No alias	eukaryotic translation initiation factor 2 family...	0.02	OrthoFinder output from all 47 species
Aob_g07436	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.02	OrthoFinder output from all 47 species
Aop_g35971	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.03	OrthoFinder output from all 47 species
Msp_g13519	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.03	OrthoFinder output from all 47 species
Pir_g37687	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.03	OrthoFinder output from all 47 species
Pp3c26_12510V3.1	Pp3c26_12510	eukaryotic translation initiation factor 2 (eIF-2) family protein	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011357	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.02	OrthoFinder output from all 47 species
Sam_g25594	No alias	Met-tRNA positioning component *(eIF5B) of initiator...	0.03	OrthoFinder output from all 47 species
Solyc03g058390.2.1	Solyc03g058390	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc06g054400.3.1	Solyc06g054400	Met-tRNA positioning component eIF5B of initiator tRNA...	0.02	OrthoFinder output from all 47 species
Zm00001e026670_P001	Zm00001e026670	Met-tRNA positioning component eIF5B of initiator tRNA...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	764	971
IPR023115	TIF_IF2_dom3	1090	1201
IPR004161	EFTu-like_2	999	1075

External Links

No external refs found!

Dac_g13418

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation