Zm00001d014013 (GRMZM2G159399)


Aliases : GRMZM2G159399

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16 (ARF16)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d014013
Cluster HCCA cluster: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G34170 ARF13 AUXIN RESPONSE FACTOR 13 0.02 Gene family
AT1G34310 ARF12 auxin response factor 12 0.02 Gene family
AT1G34410 ARF21 auxin response factor 21 0.02 Gene family
AT1G35520 ARF15 auxin response factor 15 0.02 Gene family
AT2G28350 ARF10 auxin response factor 10 0.01 Gene family
AT4G23980 ARF9 auxin response factor 9 0.25 Gene family
GSVIVT01004942001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.01 Gene family
GSVIVT01008639001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
GSVIVT01020805001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os01g54990 Os01g0753500 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.12 Gene family
Solyc01g096070.3.1 Solyc01g096070.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
Solyc07g042260.3.1 Solyc07g042260.3 No description available 0.01 Gene family
Zm00001d015243 GRMZM2G102845 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d036593 GRMZM2G089640 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 274 357
IPR003340 B3_DNA-bd 118 219
No external refs found!