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  5. Dac_g12389

Dac_g12389


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g12389
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00134970 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00189870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00190300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00180200 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00040150 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G19090 No alias Protein of unknown function (DUF630 and DUF632) 0.07 OrthoFinder output from all 47 species
AT3G51290 No alias Protein of unknown function (DUF630) ;Protein of unknown... 0.05 OrthoFinder output from all 47 species
AT4G30130 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
AT5G25590 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
Adi_g054712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25168 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g28263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15683 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g28521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48446 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g03826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09870 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene04412.t1 Aspi01Gene04412 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene22592.t1 Aspi01Gene22592 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.05 OrthoFinder output from all 47 species
Azfi_s0385.g067523 No alias not classified & original description: CDS=1-2535 0.04 OrthoFinder output from all 47 species
Cba_g01214 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g14622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G064300.1 Ceric.03G064300 not classified & original description: pacid=50572356... 0.04 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.07 OrthoFinder output from all 47 species
Ceric.21G041700.1 Ceric.21G041700 not classified & original description: pacid=50603626... 0.04 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.05 OrthoFinder output from all 47 species
Dcu_g01809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018276001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023992001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_15914 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g43770.1 LOC_Os02g43770 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g07980.1 LOC_Os05g07980 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g16640.1 LOC_Os05g16640 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os05g32760.1 LOC_Os05g32760 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g11070.1 LOC_Os07g11070 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g36760.1 LOC_Os09g36760 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g37040.1 LOC_Os09g37040 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g03363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10432395g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_13974g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_160114g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g10713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31183 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g16376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006218 No alias not classified & original description: CDS=798-3371 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020758 No alias not classified & original description: CDS=148-2271 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021336 No alias not classified & original description: CDS=1-2424 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024846 No alias not classified & original description: CDS=1-2247 0.02 OrthoFinder output from all 47 species
Sam_g16580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g47613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo425043 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g090270.4.1 Solyc01g090270 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc01g111740.3.1 Solyc01g111740 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc02g083610.4.1 Solyc02g083610 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g054880.3.1 Solyc04g054880 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g07617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30794 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19034 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e002360_P001 Zm00001e002360 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e003599_P001 Zm00001e003599 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e021207_P003 Zm00001e021207 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e021917_P001 Zm00001e021917 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e027205_P001 Zm00001e027205 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e035963_P001 Zm00001e035963 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e035991_P001 Zm00001e035991 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e037852_P002 Zm00001e037852 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 288 590
IPR006868 DUF630 1 59
No external refs found!