Dac_g11720 (PAD2)

Aliases : PAD2

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none

Gene families : OG0004574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004574_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g11720

Target	Alias	Description	ECC score	Gene Family Method
AT3G51260	PAD1	20S proteasome alpha subunit PAD1	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020830.84	PAD2	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Cre01.g030850	PAD1	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Dcu_g02688	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Mp6g07820.1	PAD2	component alpha type-4 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Msp_g00381	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Nbi_g00471	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Pir_g00896	PAD2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Solyc01g111450.3.1	PAD2, Solyc01g111450	component alpha type-4 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Tin_g05476	PAD2	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0070403	NAD+ binding	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000426	Proteasome_asu_N	4	26
IPR001353	Proteasome_sua/b	27	210

External Links

No external refs found!