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  5. Dac_g11687

Dac_g11687


Description : pre-60S ribosomal subunit assembly factor *(SMO4) & original description: none


Gene families : OG0004538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004538_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g11687
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT2G40430 No alias CONTAINS InterPro DOMAIN/s: P60-like... 0.02 OrthoFinder output from all 47 species
Adi_g025239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0057.g034252 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.04 OrthoFinder output from all 47 species
Cre07.g348250 No alias Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g01228 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.04 OrthoFinder output from all 47 species
Dde_g13294 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.04 OrthoFinder output from all 47 species
Ehy_g01055 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.03 OrthoFinder output from all 47 species
Mp1g17930.1 No alias pre-60S ribosomal subunit assembly factor (SMO4) 0.01 OrthoFinder output from all 47 species
Msp_g11709 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.06 OrthoFinder output from all 47 species
Pir_g05711 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.04 OrthoFinder output from all 47 species
Sam_g07520 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.03 OrthoFinder output from all 47 species
Sam_g28995 No alias pre-60S ribosomal subunit assembly factor *(SMO4) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011687 Nop53/GLTSCR2 9 350
No external refs found!