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  5. Dac_g11068

Dac_g11068


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g11068
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07420 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G07430 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g046688 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17009 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g41068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24708 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11060 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11400 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22635 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10592 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11491 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g21986 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16818.t1 Aspi01Gene16818 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24083.t2 Aspi01Gene24083 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63093.t1 Aspi01Gene63093 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g024992 No alias pectin methylesterase & original description: CDS=226-1431 0.04 OrthoFinder output from all 47 species
Azfi_s0055.g033955 No alias pectin methylesterase & original description: CDS=387-1493 0.03 OrthoFinder output from all 47 species
Azfi_s0648.g080900 No alias pectin methylesterase & original description: CDS=62-1303 0.04 OrthoFinder output from all 47 species
Azfi_s1046.g096024 No alias not classified & original description: CDS=62-952 0.05 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12205 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G069000.1 Ceric.10G069000 pectin methylesterase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.11G007600.1 Ceric.11G007600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G037000.1 Ceric.13G037000 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037800.1 Ceric.13G037800 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G007600.1 Ceric.14G007600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G056200.1 Ceric.21G056200 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G046900.1 Ceric.35G046900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G035900.1 Ceric.36G035900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20667 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07472 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11351 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14896 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02245 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g12472 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14386 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17111 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19236 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31652 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013827001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_17798 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_39595 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_41518 No alias Probable pectinesterase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_41519 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Len_g07605 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g09832 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15828 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_16389g0020 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_6149868g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_99816g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Msp_g04640 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06289 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42978 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11750 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13021 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14686 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30255 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05557 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25737 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32791 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10691 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11683 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20339 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g05067 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g10459 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59766 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005602 No alias pectin methylesterase & original description: CDS=911-2185 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.03 OrthoFinder output from all 47 species
Sam_g11685 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27683 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37525 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc01g109740.3.1 ATPE11, PE11,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11007 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g13569 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g29378 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49578 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g49901 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01868 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03223 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10170 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14064 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20547 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 94 390
No external refs found!