Zm00001d013688 (GRMZM2G077828)


Aliases : GRMZM2G077828

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 9 (CNGC9)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d013688
Cluster HCCA cluster: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G15990 CNGC7, ATCNGC7 cyclic nucleotide gated channel 7 0.02 Gene family
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.08 Gene family
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.07 Gene family
AT5G14870 CNGC18, ATCNGC18 cyclic nucleotide-gated channel 18 0.1 Gene family
GSVIVT01007785001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
GSVIVT01015970001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
LOC_Os03g44440 Os03g0646300 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
LOC_Os06g33570 Os06g0527100 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os12g06570 Os12g0163000,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.1 Gene family
LOC_Os12g28260 Os12g0468500 34.22 transport.cyclic nucleotide or calcium regulated... 0.09 Gene family
Solyc02g088560.3.1 Solyc02g088560.3 No description available 0.02 Gene family
Solyc03g116850.3.1 Solyc03g116850.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc08g069140.3.1 Solyc08g069140.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d012614 GRMZM2G090528 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d041309 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 87 411
No external refs found!