LOC_Os07g31310.1


Description : Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana (sp|b3h672|pp317_arath : 397.0)


Gene families : OG_01_0001060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001060_tree ,
OG_02_0001470 (LandPlants) Phylogenetic Tree(s): OG_02_0001470_tree ,
OG_03_0012025 (SeedPlants) Phylogenetic Tree(s): OG_03_0012025_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g31310.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
AT3G09650 CRM3, HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Gb_34895 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 Archaeplastida
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 Archaeplastida
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.04 Archaeplastida
Smo105853 No alias Pentatricopeptide repeat-containing protein At3g09650,... 0.03 Archaeplastida
Solyc01g088750.3.1 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.04 Archaeplastida
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 Archaeplastida
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
AMTR_s00019p00220910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.03 LandPlants
AT1G03100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 LandPlants
AT1G69290 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 LandPlants
Gb_34895 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 LandPlants
MA_46631g0010 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.03 LandPlants
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.04 LandPlants
Solyc01g088750.3.1 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.04 LandPlants
Solyc04g008410.3.1 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.03 LandPlants
Zm00001e019596_P001 No alias Pentatricopeptide repeat-containing protein At1g69290... 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 612 632
IPR002885 Pentatricopeptide_repeat 524 551
No external refs found!