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  5. Dac_g10256

Dac_g10256 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB

Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g10256
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G05500 SYT5, NTMC2T2.1,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
AT2G20990 NTMC2TYPE1.1,... synaptotagmin A 0.02 OrthoFinder output from all 47 species
Aev_g03246 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Ala_g24226 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38772.t1 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Ehy_g06901 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
LOC_Os02g25060.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.04 OrthoFinder output from all 47 species
LOC_Os07g22640.1 NTMC2TYPE4,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433495g0010 NTMC2TYPE4, NTMC2T4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g18699 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06041 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_14990V3.1 NTMC2T1.2, SYTB,... synaptotagmin A 0.01 OrthoFinder output from all 47 species
Solyc12g009790.2.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g12221 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 248
IPR000008 C2_dom 417 518
IPR000008 C2_dom 262 363
No external refs found!