Dac_g09935 (ATGCN1, GCN1)

Aliases : ATGCN1, GCN1

Description : not classified & original description: none

Gene families : OG0003164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003164_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g09935

Target	Alias	Description	ECC score	Gene Family Method
AT5G60790	ATGCN1, GCN1	ABC transporter family protein	0.02	OrthoFinder output from all 47 species
Cre11.g467781	ATGCN1, GCN1	ABC transporter F family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Lfl_g01954	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g04312	ATGCN1, GCN1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pp3c1_33790V3.1	ATGCN1, GCN1, Pp3c1_33790	ABC transporter family protein	0.03	OrthoFinder output from all 47 species
Ppi_g18687	ATGCN1, GCN1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc11g069090.2.1	ATGCN1, GCN1,...	ABC transporter F family member 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Spa_g07883	ATGCN1, GCN1	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
CC	GO:0031082	BLOC complex	IEP	HCCA
CC	GO:0031083	BLOC-1 complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	399	529
IPR032781	ABC_tran_Xtn	282	358
IPR003439	ABC_transporter-like_ATP-bd	88	243

External Links

No external refs found!