Dac_g09136

Description : not classified & original description: none

Gene families : OG0004671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004671_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g09136

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc10g005910.2.1	Solyc10g005910	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008649	rRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0031167	rRNA methylation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0070037	rRNA (pseudouridine) methyltransferase activity	IEP	HCCA
BP	GO:0070475	rRNA base methylation	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	166	287
IPR006073	GTP-bd	363	486
IPR032859	KH_dom-like	550	629

External Links

No external refs found!