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  5. Dac_g09075

Dac_g09075


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g09075

Target Alias Description ECC score Gene Family Method Actions
Ceric.27G022700.1 Ceric.27G022700 E3 ubiquitin ligase & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g24860 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26671 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g014230.4.1 Solyc01g014230 U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g100000.3.1 Solyc12g100000 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 239 308
IPR000225 Armadillo 664 701
IPR000225 Armadillo 539 578
IPR000225 Armadillo 622 660
No external refs found!