Dac_g08588


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g08588

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00165910 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G03510 RMA1, ATRMA1 RING membrane-anchor 1 0.02 OrthoFinder output from all 47 species
Adi_g101989 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05095 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07901 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68805 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027095 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s3314.g115293 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-558 0.03 OrthoFinder output from all 47 species
Ceric.18G044800.1 RMA3, ATRMA3,... E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G044900.1 Ceric.18G044900 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.18G045100.1 Ceric.18G045100 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G045400.1 Ceric.18G045400 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G045500.1 Ceric.18G045500 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.19G013000.1 Ceric.19G013000 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G073100.1 Ceric.32G073100 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g35812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18993 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11588 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g42690.3 LOC_Os02g42690 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Lfl_g23170 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13792 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g28831 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41713 RMA1, ATRMA1 E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62388 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012732 RMA3, ATRMA3 E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-450 0.03 OrthoFinder output from all 47 species
Solyc01g109340.4.1 Solyc01g109340 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g078320.3.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g05542 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003329_P001 Zm00001e003329 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e041298_P002 RMA1, ATRMA1,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!