LOC_Os07g28090.1


Description : subfamily ABCB transporter


Gene families : OG_01_0007618 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007618_tree ,
OG_02_0008236 (LandPlants) Phylogenetic Tree(s): OG_02_0008236_tree ,
OG_03_0008541 (SeedPlants) Phylogenetic Tree(s): OG_03_0008541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g28090.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
Solyc03g026310.4.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e033453_P003 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_40287 No alias subfamily ABCB transporter 0.02 LandPlants
Solyc03g026310.4.1 No alias subfamily ABCB transporter 0.02 LandPlants
Zm00001e033453_P003 No alias no hits & (original description: none) 0.04 LandPlants
Gb_40287 No alias subfamily ABCB transporter 0.02 SeedPlants
Solyc03g026310.4.1 No alias subfamily ABCB transporter 0.02 SeedPlants
Zm00001e033453_P003 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 464 615
IPR011527 ABC1_TM_dom 99 368
No external refs found!