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  5. Dac_g08450

Dac_g08450


Description : splicing factor *(PRP38) & original description: none


Gene families : OG0004863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g08450
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g01630.1 LOC_Os09g01630 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc01g100060.4.1 Solyc01g100060 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009450_P001 Zm00001e009450 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 11 173
No external refs found!