Dac_g08252 (FTSH5, VAR1)

Aliases : FTSH5, VAR1

Description : component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes & original description: none

Gene families : OG0005126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005126_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g08252
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00232760	FTSH5, VAR1,...	Protein degradation.peptidase families.metallopeptidase...	0.06	OrthoFinder output from all 47 species
AT1G50250	FTSH1	FTSH protease 1	0.09	OrthoFinder output from all 47 species
AT5G42270	FTSH5, VAR1	FtsH extracellular protease family	0.11	OrthoFinder output from all 47 species
Adi_g010069	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Aev_g18234	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Ala_g14669	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.11	OrthoFinder output from all 47 species
Als_g08677	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.09	OrthoFinder output from all 47 species
Als_g51773	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Aob_g06009	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Aob_g26986	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Aop_g03836	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Aspi01Gene30258.t1	FTSH1, Aspi01Gene30258	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Azfi_s0002.g001361	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035780	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Cba_g71747	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Ceric.14G083900.1	FTSH1, Ceric.14G083900	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Cre12.g485800	FTSH1	Protein degradation.peptidase families.metallopeptidase...	0.09	OrthoFinder output from all 47 species
Dcu_g12715	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Dde_g00875	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Ehy_g09917	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
GSVIVT01008686001	FTSH1	ATP-dependent zinc metalloprotease FTSH 1, chloroplastic...	0.04	OrthoFinder output from all 47 species
Gb_06887	FTSH1	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.04	OrthoFinder output from all 47 species
LOC_Os06g51029.1	FTSH1, LOC_Os06g51029	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.05	OrthoFinder output from all 47 species
Len_g16157	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Lfl_g21843	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Mp3g08790.1	FTSH1	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.05	OrthoFinder output from all 47 species
Msp_g09054	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Nbi_g12160	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Ore_g36173	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Ore_g36174	FTSH1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11763	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Pnu_g06088	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Ppi_g16389	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023581	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Sam_g09587	No alias	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.09	OrthoFinder output from all 47 species
Smo139726	FTSH1	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
Solyc04g082250.3.1	FTSH5, VAR1,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.05	OrthoFinder output from all 47 species
Spa_g06354	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.12	OrthoFinder output from all 47 species
Tin_g09560	FTSH1	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Zm00001e030153_P001	FTSH1, Zm00001e030153	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	432	473
IPR000642	Peptidase_M41	491	683
IPR003959	ATPase_AAA_core	278	409

External Links

No external refs found!

Dac_g08252 (FTSH5, VAR1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation