LOC_Os07g27300.2


Description : pre-mRNA-processing protein (LUC7)


Gene families : OG_01_0005265 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005265_tree ,
OG_02_0004961 (LandPlants) Phylogenetic Tree(s): OG_02_0004961_tree ,
OG_03_0006913 (SeedPlants) Phylogenetic Tree(s): OG_03_0006913_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g27300.2
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT5G51410 No alias LUC7 N_terminus domain-containing protein 0.07 Archaeplastida
Mp2g06220.1 No alias pre-mRNA-processing protein (LUC7) 0.06 Archaeplastida
Pp3c15_9680V3.1 No alias LUC7 N_terminus domain-containing protein 0.02 Archaeplastida
Smo149618 No alias No description available 0.04 Archaeplastida
Zm00001e009535_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e033431_P001 No alias pre-mRNA-processing protein (LUC7) 0.06 Archaeplastida
AT5G51410 No alias LUC7 N_terminus domain-containing protein 0.05 LandPlants
Mp2g06220.1 No alias pre-mRNA-processing protein (LUC7) 0.06 LandPlants
Pp3c15_9680V3.1 No alias LUC7 N_terminus domain-containing protein 0.02 LandPlants
Smo149618 No alias No description available 0.03 LandPlants
Zm00001e009535_P001 No alias No annotation 0.05 LandPlants
Zm00001e033431_P001 No alias pre-mRNA-processing protein (LUC7) 0.06 LandPlants
AT5G51410 No alias LUC7 N_terminus domain-containing protein 0.04 SeedPlants
Zm00001e009535_P001 No alias No annotation 0.05 SeedPlants
Zm00001e033431_P001 No alias pre-mRNA-processing protein (LUC7) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site selection IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004882 Luc7-rel 2 247
No external refs found!