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Description : not classified & original description: none
Gene families : OG0003504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003504_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g07102 | |
| Cluster | HCCA: Cluster_154 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G29210 | No alias | splicing factor PWI domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g019655 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07320 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54316 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11891 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012299 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g678050 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g46327 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21232 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024906001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33063 | No alias | component SRm160 of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10938 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g21958 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g61010 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g42357 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07002 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g030390.3.1 | Solyc09g030390 | component SRm160 of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23972 | No alias | component *(SRm160) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005801 | cis-Golgi network | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |