LOC_Os07g25450.1


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. SUVH2/9 methyl-DNA-binding factor of DNA methylation pathway


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0000718 (LandPlants) Phylogenetic Tree(s): OG_02_0000718_tree ,
OG_03_0003509 (SeedPlants) Phylogenetic Tree(s): OG_03_0003509_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g25450.1
Cluster HCCA: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013854001 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Mp6g20230.1 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 Archaeplastida
Solyc03g093700.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Zm00001e007370_P001 No alias class V/Su(var) histone methyltransferase component of... 0.06 Archaeplastida
Zm00001e009735_P001 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e019503_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031994_P003 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e033937_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_09748 No alias class V/Su(var) histone methyltransferase component of... 0.02 LandPlants
Zm00001e003855_P002 No alias class V/Su(var) histone methyltransferase component of... 0.03 LandPlants
Zm00001e031994_P003 No alias class V/Su(var) histone methyltransferase component of... 0.03 LandPlants
Solyc09g090810.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 SeedPlants
Zm00001e003855_P002 No alias class V/Su(var) histone methyltransferase component of... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 423 522
IPR003105 SRA_YDG 239 392
IPR001214 SET_dom 541 673
No external refs found!