AMTR_s00077p00063420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.40

Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00063420
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00072p00134750 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.05 Archaeplastida
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.05 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.04 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 Archaeplastida
AT3G29030 EXP5, ATHEXP... expansin A5 0.07 Archaeplastida
AT3G55500 EXPA16, ATHEXP... expansin A16 0.03 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
GSVIVT01028215001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01028474001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01030192001 No alias Expansin-A2 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
Gb_01500 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01501 No alias alpha-class expansin 0.02 Archaeplastida
Gb_01502 No alias alpha-class expansin 0.03 Archaeplastida
Gb_01506 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_07423 No alias alpha-class expansin 0.03 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.09 Archaeplastida
Gb_07438 No alias alpha-class expansin 0.02 Archaeplastida
Gb_07439 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10232070g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_12056g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_40671g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86877g0010 No alias alpha-class expansin 0.07 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c14_18450V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19690V3.1 No alias expansin A16 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.05 Archaeplastida
Pp3c22_3550V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c22_760V3.1 No alias expansin A1 0.04 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.05 Archaeplastida
Pp3c8_1330V3.1 No alias expansin A4 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo230202 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.08 Archaeplastida
Smo90332 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc03g115300.2.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.05 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc09g018020.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Zm00001e003887_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003888_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e003889_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e017221_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.02 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 LandPlants
AT2G28950 EXPA6, ATEXP6,... expansin A6 0.03 LandPlants
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 LandPlants
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 LandPlants
AT3G29030 EXP5, ATHEXP... expansin A5 0.04 LandPlants
AT3G55500 EXPA16, ATHEXP... expansin A16 0.03 LandPlants
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 LandPlants
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 LandPlants
Gb_04404 No alias alpha-class expansin 0.02 LandPlants
Gb_07423 No alias alpha-class expansin 0.03 LandPlants
Gb_07424 No alias alpha-class expansin 0.04 LandPlants
Gb_07438 No alias alpha-class expansin 0.02 LandPlants
Gb_07439 No alias alpha-class expansin 0.05 LandPlants
LOC_Os01g14660.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os02g16730.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g06020.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g21820.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os03g25990.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os05g39990.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os10g30340.1 No alias alpha-class expansin 0.02 LandPlants
LOC_Os10g39110.1 No alias alpha-class expansin 0.02 LandPlants
MA_104065g0020 No alias alpha-class expansin 0.02 LandPlants
MA_40671g0010 No alias alpha-class expansin 0.03 LandPlants
MA_86877g0010 No alias alpha-class expansin 0.05 LandPlants
MA_8784268g0010 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c20_5780V3.1 No alias expansin A15 0.03 LandPlants
Pp3c24_15400V3.1 No alias expansin A15 0.03 LandPlants
Pp3c8_1330V3.1 No alias expansin A4 0.02 LandPlants
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 LandPlants
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.02 LandPlants
Solyc08g080060.4.1 No alias alpha-class expansin 0.02 LandPlants
Solyc09g010860.4.1 No alias alpha-class expansin 0.02 LandPlants
Solyc09g018020.3.1 No alias alpha-class expansin 0.05 LandPlants
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.03 SeedPlants
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 SeedPlants
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 SeedPlants
AT3G55500 EXPA16, ATHEXP... expansin A16 0.03 SeedPlants
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 SeedPlants
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 SeedPlants
Gb_04404 No alias alpha-class expansin 0.02 SeedPlants
Gb_07424 No alias alpha-class expansin 0.02 SeedPlants
Gb_07438 No alias alpha-class expansin 0.02 SeedPlants
Gb_07439 No alias alpha-class expansin 0.05 SeedPlants
LOC_Os01g14660.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os03g06020.1 No alias alpha-class expansin 0.02 SeedPlants
LOC_Os10g30340.1 No alias alpha-class expansin 0.02 SeedPlants
MA_184474g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_37884g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_40671g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_86877g0010 No alias alpha-class expansin 0.06 SeedPlants
MA_8784268g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc09g010860.4.1 No alias alpha-class expansin 0.02 SeedPlants
Solyc09g018020.3.1 No alias alpha-class expansin 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 162 239
IPR009009 RlpA-like_DPBB 66 150
No external refs found!