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  5. Dac_g06588

Dac_g06588 (CHC1)


Aliases : CHC1

Description : SMARCD component *(SWP73) of chromatin remodeling complex & original description: none


Gene families : OG0004548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g06588
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g040515 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Aop_g05626 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.03 OrthoFinder output from all 47 species
GSVIVT01008530001 CHC1 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Gb_09155 CHC1 component BAF60 of chromatin remodeling complex 0.04 OrthoFinder output from all 47 species
Len_g10118 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Nbi_g02153 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ore_g16905 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Smo43289 CHC1 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 265 336
No external refs found!