Dac_g06527

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g06527

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00155p00026110	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Aev_g37884	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g12222	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0076.g037929	No alias	E3 ubiquitin ligase & original description: CDS=24-2345	0.03	OrthoFinder output from all 47 species
Azfi_s0288.g063259	No alias	E3 ubiquitin ligase & original description: CDS=563-3001	0.04	OrthoFinder output from all 47 species
Ehy_g02899	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Mp4g07620.1	No alias	U-box domain-containing protein 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc09g025270.3.1	Solyc09g025270	U-box domain-containing protein 3 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	603	641
IPR000225	Armadillo	562	600
IPR000225	Armadillo	644	682
IPR000225	Armadillo	685	723
IPR003613	Ubox_domain	241	311

External Links

No external refs found!