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  5. Dac_g06482

Dac_g06482


Description : substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0006597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g06482

Target Alias Description ECC score Gene Family Method Actions
Adi_g058720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02152 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aop_g12864 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ceric.05G062500.1 Ceric.05G062500 substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.18 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre04.g226450 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 OrthoFinder output from all 47 species
Dcu_g08213 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020240001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 OrthoFinder output from all 47 species
LOC_Os03g27970.1 LOC_Os03g27970 component Prp17 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species
Mp1g17450.1 No alias component Prp17 of non-snRNP MOS4-associated complex 0.03 OrthoFinder output from all 47 species
Sam_g08137 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Smo78344 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Solyc02g078970.4.1 Solyc02g078970 component Prp17 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species
Spa_g07836 No alias substrate adaptor *(PRP17) of CUL4-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 513 548
IPR001680 WD40_repeat 293 329
IPR001680 WD40_repeat 334 372
IPR001680 WD40_repeat 421 457
IPR001680 WD40_repeat 554 591
No external refs found!