Dac_g05782 (MGO1, TOP1, TOP1ALPHA)

Aliases : MGO1, TOP1, TOP1ALPHA

Description : DNA topoisomerase *(TOP1) & original description: none

Gene families : OG0002461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002461_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g05782

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00193620	MGO1, TOP1,...	Cell cycle.interphase.DNA replication.preinitiation.TOP1...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00026580	MGO1, TOP1,...	Cell cycle.interphase.DNA replication.preinitiation.TOP1...	0.04	OrthoFinder output from all 47 species
AT5G55300	MGO1, TOP1, TOP1ALPHA	DNA topoisomerase I alpha	0.03	OrthoFinder output from all 47 species
Adi_g087257	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g104710	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g15949	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18925	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g13391	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g14348	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07548	MGO1, TOP1, TOP1ALPHA	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15179	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.07G062200.1	TOP1BETA, TOP1,...	DNA topoisomerase *(TOP1) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G042500.1	TOP1BETA, TOP1,...	DNA topoisomerase *(TOP1) & original description:...	0.02	OrthoFinder output from all 47 species
Ehy_g04011	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12929	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g13694	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.06	OrthoFinder output from all 47 species
Msp_g35484	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16376	No alias	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g05242	TOP1BETA, TOP1	DNA topoisomerase *(TOP1) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003916	DNA topoisomerase activity	None	Extended
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006265	DNA topological change	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005669	transcription factor TFIID complex	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009360	DNA polymerase III complex	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
CC	GO:0042575	DNA polymerase complex	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008336	TopoI_DNA-bd_euk	430	641
IPR025834	TopoI_C_dom	904	972
IPR013500	TopoI_cat_euk	644	868

External Links

No external refs found!

Dac_g05782 (MGO1, TOP1, TOP1ALPHA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation