Aliases : MUR10, ATCESA7, CESA7, IRX3
Description : not classified & original description: none
Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00017p00225060 | CSLB04, ATCSLB4,... | Cellulose synthase-like protein H1 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00019p00246190 | CSLD1, ATCSLD1,... | Cell wall.hemicellulose.heteromannan.synthesis.mannan... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00022p00129900 | ATCSLD4, CSLD4,... | Cell wall.hemicellulose.heteromannan.synthesis.mannan... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00061p00200560 | ATCSLE1, CSLE1,... | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
AT2G32530 | ATCSLB03, CSLB03, ATCSLB3 | cellulose synthase-like B3 | 0.02 | OrthoFinder output from all 47 species | |
AT2G32610 | ATCSLB01, ATCSLB1, CSLB01 | cellulose synthase-like B1 | 0.02 | OrthoFinder output from all 47 species | |
AT5G16910 | ATCSLD2, CSLD2 | cellulose-synthase like D2 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g081315 | ATCSLD5, CSLD5, SOS6 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g30416 | MUR10, ATCESA7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene40791.t1 | ATH-A, CESA2,... | catalytic component *(CesA) of cellulose synthase... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004272001 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01004458001 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01006760001 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01018144001 | ATCSLG2, CSLG2 | Cellulose synthase-like protein G2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01022285001 | ATH-A, CESA2, ATCESA2 | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01023837001 | ATH-A, CESA2, ATCESA2 | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01027717001 | ATCSLG2, CSLG2 | Cellulose synthase-like protein G2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01030462001 | CSLB04, ATCSLB4, ATCSLB04 | Cellulose synthase-like protein H1 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01032096001 | IXR1, CEV1,... | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.03 | OrthoFinder output from all 47 species | |
Gb_09688 | MUR10, ATCESA7,... | Cellulose synthase A catalytic subunit 9 [UDP-forming]... | 0.02 | OrthoFinder output from all 47 species | |
Gb_39671 | ATCSLD3, KJK, CSLD3 | mannan synthase (CSLD) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g30120.1 | ATCSLE1, CSLE1,... | Cellulose synthase-like protein E1 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
MA_174181g0010 | IXR1, CEV1,... | catalytic component CesA of cellulose synthase complex | 0.02 | OrthoFinder output from all 47 species | |
MA_195271g0010 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
MA_264460g0010 | ATCSLE1, CSLE1 | Cellulose synthase-like protein E6 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g09621 | MUR10, ATCESA7,... | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g10476 | MUR10, ATCESA7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g29917 | IXR1, CEV1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g36488 | ATH-A, CESA2, ATCESA2 | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g22229 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g38934 | No alias | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g072790.2.1 | ATH-A, CESA2,... | catalytic component CesA of cellulose synthase complex | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g005280.2.1 | ATCSLD3, KJK,... | mannan synthase (CSLD) | 0.01 | OrthoFinder output from all 47 species | |
Solyc09g089573.1.1 | ATCSLG3, CSLG3,... | Cellulose synthase-like protein G3 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Solyc12g015770.3.1 | ATCSLE1, CSLE1,... | NOB1 pre-rRNA processing endonuclease involved in ITS1... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g56569 | ATCSLD3, KJK, CSLD3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g21851 | CESA6, PRC1, IXR2, E112 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e004740_P001 | ATCSLD3, KJK,... | Probable mixed-linked glucan synthase 7 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e008117_P005 | CSLB04, ATCSLB4,... | D-glucan synthase (CSLH) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010533_P001 | ATCSLD3, KJK,... | D-glucan synthase (CSLF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEA | Interproscan |
BP | GO:0030244 | cellulose biosynthetic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No external refs found! |