LOC_Os07g22534.1


Description : pre-40S ribosomal subunit assembly factor (RID3)


Gene families : OG_01_0002482 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002482_tree ,
OG_02_0002778 (LandPlants) Phylogenetic Tree(s): OG_02_0002778_tree ,
OG_03_0002789 (SeedPlants) Phylogenetic Tree(s): OG_03_0002789_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g22534.1
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
Cre06.g251350 No alias Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01009478001 No alias Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_10613 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.04 Archaeplastida
Mp7g09900.1 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.02 Archaeplastida
Pp3c18_8470V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Archaeplastida
Smo442453 No alias Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e032455_P007 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.09 Archaeplastida
GSVIVT01009478001 No alias Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_10613 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.04 LandPlants
Mp7g09900.1 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.02 LandPlants
Pp3c18_8470V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.06 LandPlants
Smo442453 No alias Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana 0.02 LandPlants
Zm00001e032455_P007 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.09 LandPlants
GSVIVT01009478001 No alias Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana 0.02 SeedPlants
Gb_10613 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.04 SeedPlants
Zm00001e032455_P007 No alias pre-40S ribosomal subunit assembly factor (RID3) 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 260 292
IPR001680 WD40_repeat 164 200
IPR001680 WD40_repeat 118 148
No external refs found!