Zm00001d013071 (GRMZM2G152796)


Aliases : GRMZM2G152796

Description : 27.3.40 RNA.regulation of transcription.Aux/IAA family SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro. SHORT HYPOCOTYL 2 (SHY2)


Gene families : OG_01_0000182 (Gene family) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d013071
Cluster HCCA cluster: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT2G22670 IAA8 indoleacetic acid-induced protein 8 0.04 Gene family
AT3G23050 AXR2, IAA7 indole-3-acetic acid 7 0.05 Gene family
AT5G65670 IAA9 indole-3-acetic acid inducible 9 0.03 Gene family
LOC_Os03g43400 Os03g0633500 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.03 Gene family
LOC_Os03g58350 Os03g0797800 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.09 Gene family
LOC_Os05g14180 Os05g0230700 30.11 signalling.light phytochrome-associated protein 2... 0.05 Gene family
LOC_Os05g48590 Os05g0559400 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
LOC_Os06g22870 Os06g0335500 30.11 signalling.light phytochrome-associated protein 2... 0.05 Gene family
LOC_Os12g40890 Os12g0601300 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.04 Gene family
LOC_Os12g40900 Os12g0601400 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
MA_53529g0010 No alias 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc04g054280.2.1 Solyc04g054280.2 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.01 Gene family
Solyc06g008580.3.1 Solyc06g008580.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc06g008590.3.1 Solyc06g008590.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Solyc06g053830.3.1 Solyc06g053830.3 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.03 Gene family
Zm00001d033319 GRMZM2G366373 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family
Zm00001d033976 GRMZM2G159285 27.3.40 RNA.regulation of transcription.Aux/IAA family... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 40 180
No external refs found!