Dac_g05473 (ATARFA1F, ARFA1F)

Aliases : ATARFA1F, ARFA1F

Description : not classified & original description: none

Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g05473
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
Aev_g12102	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g07482	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g19389	ATARFB1B, ARFB1B	ARF-GTPase *(ARFA) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene22465.t1	ATARFB1B,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g68389	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08383	ATARFA1F, ARFA1F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g09806	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g30050	No alias	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g05534	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g05681	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g04441	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Mp3g13920.1	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Mp7g13050.1	ATARFA1F, ARFA1F	ARF-GTPase	0.02	OrthoFinder output from all 47 species
Nbi_g15523	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06024	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g05142	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24132	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29324	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g49717	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g51715	ATARFA1B, ARFA1B	ARF-GTPase *(ARF1) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g05371	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g05379	ATARFA1F, ARFA1F	ARF-GTPase *(ARF1) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e011790_P001	ATARFA1B,...	ARF-GTPase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	1	145

External Links

No external refs found!

Dac_g05473 (ATARFA1F, ARFA1F)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation