Zm00001d013059 (GRMZM5G844195)

Aliases : GRMZM5G844195

Description : protein.targeting.secretory pathway.vacuole VPS35 homolog B (VPS35B)

Gene families : OG_01_0002944 (Gene family) Phylogenetic Tree(s): OG0002944_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d013059
Cluster HCCA cluster: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AT2G17790 ZIP3, VPS35A VPS35 homolog A 0.09 Gene family
AT3G51310 VPS35C VPS35 homolog C 0.02 Gene family
Cpa|evm.model.tig00001086.22 No alias protein.targeting.secretory pathway.vacuole... 0.02 Gene family
Cre01.g029650 No alias protein.targeting.secretory pathway.vacuole... 0.02 Gene family
GSVIVT01009948001 No alias protein.targeting.secretory pathway.vacuole... 0.08 Gene family
LOC_Os03g58700 Os03g0801600 protein.targeting.secretory pathway.vacuole... 0.09 Gene family
Smo167991 PACid_15423127 protein.targeting.secretory pathway.vacuole... 0.05 Gene family
Solyc02g083560.3.1 Solyc02g083560.3 protein.targeting.secretory pathway.vacuole... 0.2 Gene family
Solyc03g033400.3.1 Solyc03g033400.3 protein.targeting.secretory pathway.vacuole... 0.06 Gene family

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA InterProScan
CC GO:0030906 retromer, cargo-selective complex IEA InterProScan
BP GO:0042147 retrograde transport, endosome to Golgi IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005378 Vps35 22 760
No external refs found!