- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00177p00063110 | DND1, ATCNGC2,... | Solute transport.channels.VIC superfamily.cyclic... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15990 | CNGC7, ATCNGC7 | cyclic nucleotide gated channel 7 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G24610 | ATCNGC14, CNGC14 | cyclic nucleotide-gated channel 14 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G17690 | CNGC19, ATCNGC19 | cyclic nucleotide gated channel 19 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G01010 | ATCNGC13, CNGC13 | cyclic nucleotide-gated channel 13 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G15410 | DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-regulated ion channel family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24639 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24844 | ATCNGC20, CNGC20, CNBT1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g33029 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08048 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014442001 | DND2, CNGC4,... | Solute transport.channels.VIC superfamily.cyclic... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015970001 | ATCNGC8, CNGC8 | Solute transport.channels.VIC superfamily.cyclic... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025208001 | CNGC15, ATCNGC15 | Solute transport.channels.VIC superfamily.cyclic... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029404001 | ATCNGC20, CNGC20, CNBT1 | Solute transport.channels.VIC superfamily.cyclic... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g17251 | DND1, ATCNGC2, CNGC2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g04110.1 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel (CNGC) | 0.06 | OrthoFinder output from all 47 species | |
| Mp4g11640.1 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g01203 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g55972 | ATCNGC9, CNGC9 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g50440 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g116850.3.1 | ATCNGC8, CNGC8,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g050350.2.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g050380.4.1 | ATCNGC13,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g007840.3.1 | CNGC15,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069580.2.1 | CNGC15,... | cyclic nucleotide-gated cation channel (CNGC) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g39810 | DND2, CNGC4,... | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04129 | DND1, ATCNGC2, CNGC2 | temperature sensor protein *(CNGC2) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |