Zm00001d013034

Description : 29.2.1.2.1.2 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S2 Ribosomal protein S5 family protein

Gene families : OG_01_0001422 (Gene family) Phylogenetic Tree(s): OG0001422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Zm00001d013034
Cluster	HCCA cluster: Cluster_203

Target	Alias	Description	ECC score	Gene Family Method
AT1G58380	XW6	Ribosomal protein S5 family protein	0.04	Gene family
AT2G41840	No alias	Ribosomal protein S5 family protein	0.37	Gene family
AT3G57490	No alias	Ribosomal protein S5 family protein	0.11	Gene family
Cpa\|evm.model.tig00020961.135	No alias	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.11	Gene family
Cre01.g039250	No alias	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.17	Gene family
GSVIVT01033299001	No alias	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.14	Gene family
LOC_Os03g59310	Os03g0807800	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.31	Gene family
LOC_Os07g10660	Os07g0207400	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.28	Gene family
MA_158470g0010	No alias	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.03	Gene family
Smo67484	PACid_15411576	No description available	0.16	Gene family
Solyc04g063290.3.1	Solyc04g063290.3	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.33	Gene family
Solyc04g074300.3.1	Solyc04g074300.3	29.2.1.2.1.2 protein.synthesis.ribosomal...	0.29	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan
BP	GO:0006412	translation	IEA	InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013810	Ribosomal_S5_N	85	149
IPR005324	Ribosomal_S5_C	168	234

External Links

No external refs found!

Zm00001d013034

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation