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  5. Dac_g04580

Dac_g04580


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04580

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G72220 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G24015 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g02144 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g42113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43910.t1 Aspi01Gene43910 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46290.t1 Aspi01Gene46290 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.03 OrthoFinder output from all 47 species
Ceric.02G105300.1 ATL8, Ceric.02G105300 not classified & original description: pacid=50585310... 0.03 OrthoFinder output from all 47 species
Ceric.15G012300.1 Ceric.15G012300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.22G061900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cre01.g000700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g07013 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g03551 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g10960 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g14073 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Gb_05005 BRH1 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_30879 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.03 OrthoFinder output from all 47 species
LOC_Os02g15110.1 LOC_Os02g15110 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_391931g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_63503g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_78643g0010 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Nbi_g02407 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g00384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33653 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Solyc01g081040.4.1 Solyc01g081040 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc05g008640.1.1 RHA2A, Solyc05g008640 RHA2 signal transducer of abscisic acid perception 0.01 OrthoFinder output from all 47 species
Spa_g16053 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Spa_g24917 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g48427 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g14638 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e002233_P001 Zm00001e002233 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014302_P001 Zm00001e014302 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030877_P001 Zm00001e030877 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 146
No external refs found!