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  5. Dac_g04574

Dac_g04574 (AGL16)


Aliases : AGL16

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04574
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT4G11880 AGL14 AGAMOUS-like 14 0.03 OrthoFinder output from all 47 species
Als_g18421 AGL42 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17593.t1 AGL104, Aspi01Gene17593 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13201 AGL16 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g19342 AGL8, FUL MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g54160.1 AGL7, AP1, LOC_Os03g54160 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Lfl_g13029 AGL21 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38767 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39561 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42895 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02675 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48749 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11248 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013738_P001 AGL32, TT16,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e015447_P001 AGL6, Zm00001e015447 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e016964_P001 GL19, AGL19,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e034629_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e039774_P001 SHP2, AGL5,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 152 239
IPR002100 TF_MADSbox 78 125
No external refs found!