Zm00001d012963 (GRMZM2G144172, GRMZM2G144188)


Aliases : GRMZM2G144172, GRMZM2G144188

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Dof-type zinc finger DNA-binding family protein


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d012963
Cluster HCCA cluster: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.05 Gene family
AT1G28310 No alias Dof-type zinc finger DNA-binding family protein 0.05 Gene family
AT1G29160 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 Gene family
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.05 Gene family
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT3G55370 OBP3 OBF-binding protein 3 0.07 Gene family
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
GSVIVT01005057001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01016538001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01021086001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01025119001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.08 Gene family
LOC_Os02g49440 Os02g0726300 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os05g02150 Os05g0112200 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os07g32510 Os07g0508700,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
MA_16692g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc02g076850.2.1 Solyc02g076850.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc02g077950.2.1 Solyc02g077950.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc02g078620.1.1 Solyc02g078620.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc03g115940.3.1 Solyc03g115940.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc06g005130.3.1 Solyc06g005130.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.08 Gene family
Solyc06g071480.3.1 Solyc06g071480.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc06g076030.3.1 Solyc06g076030.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc08g008500.3.1 Solyc08g008500.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc09g010680.3.1 Solyc09g010680.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
Solyc10g086440.2.1 Solyc10g086440.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.09 Gene family
Solyc11g010940.2.1 Solyc11g010940.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc11g072500.2.1 Solyc11g072500.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.07 Gene family
Zm00001d006463 GRMZM2G064655 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.07 Gene family
Zm00001d030727 GRMZM2G123900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d038693 GRMZM2G435475 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 320 374
No external refs found!