LOC_Os07g18874.1


Description : subfamily ABCG transporter


Gene families : OG_01_0000249 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000249_tree ,
OG_02_0000734 (LandPlants) Phylogenetic Tree(s): OG_02_0000734_tree ,
OG_03_0000499 (SeedPlants) Phylogenetic Tree(s): OG_03_0000499_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g18874.1
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00013610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00215p00017850 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01002136001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_00371 No alias subfamily ABCG transporter 0.05 Archaeplastida
Gb_14532 No alias subfamily ABCG transporter 0.04 Archaeplastida
Gb_21000 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_34149 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 Archaeplastida
Mp2g14870.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g16720.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Smo111338 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Solyc03g019760.4.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
Solyc11g009100.2.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_00371 No alias subfamily ABCG transporter 0.04 LandPlants
Gb_14532 No alias subfamily ABCG transporter 0.04 LandPlants
Gb_21000 No alias subfamily ABCG transporter 0.03 LandPlants
Mp2g14870.1 No alias subfamily ABCG transporter 0.03 LandPlants
AMTR_s00325p00013080 evm_27.TU.AmTr_v1... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.01 SeedPlants
Gb_00371 No alias subfamily ABCG transporter 0.03 SeedPlants
Gb_21000 No alias subfamily ABCG transporter 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 146 297
IPR013525 ABC_2_trans 445 655
No external refs found!