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  5. Dac_g04523

Dac_g04523 (RUB1, ATRUB1, NEDD8)


Aliases : RUB1, ATRUB1, NEDD8

Description : RUB ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04523
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Dcu_g48344 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28672 RUB1, ATRUB1, NEDD8 ubiquitin-fold protein (RUB) 0.04 OrthoFinder output from all 47 species
MA_9420337g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp7g14690.1 UBQ6 component RPS27a of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g09233 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_11430V3.1 UBQ14, Pp3c4_11430 polyubiquitin 10 0.02 OrthoFinder output from all 47 species
Solyc09g098385.1.1 Solyc09g098385 Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc11g005650.1.1 Solyc11g005650 Ubiquitin-60S ribosomal protein L40 OS=Brassica rapa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!