Aliases : SVR1
Description : plastidial rRNA pseudouridine synthase *(SVR1) & original description: none
Gene families : OG0003742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os03g05806.1 | SVR1, LOC_Os03g05806 | rRNA pseudouridine synthase (RsuA) | 0.02 | OrthoFinder output from all 47 species | |
Sam_g12462 | No alias | plastidial rRNA pseudouridine synthase *(SVR1) &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000423_P001 | SVR1, Zm00001e000423 | rRNA pseudouridine synthase (RsuA) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000902 | cell morphogenesis | IEP | HCCA |
MF | GO:0004615 | phosphomannomutase activity | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | HCCA |
BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | HCCA |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019673 | GDP-mannose metabolic process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
No external refs found! |