Aliases : PDF2
Description : HD-ZIP IV-type transcription factor & original description: none
Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00094630 | EDT1, HDG11,... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g006830 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g25555 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g02216 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g07013 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g21768 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene47379.t1 | PDF2, Aspi01Gene47379 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene55386.t1 | ATML1, Aspi01Gene55386 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0015.g014154 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s1811.g107141 | ATML1 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.01G001800.1 | PDF2, Ceric.01G001800 | HD-ZIP IV-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.12G070600.1 | PDF2, Ceric.12G070600 | HD-ZIP IV-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g07731 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g11376 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g20177 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25466 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g39944 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g13320 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g20385 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01030605001 | HDG2 | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
Len_g57949 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g14381 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g08965 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g36667 | No alias | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g098200.4.1 | EDT1, HDG11,... | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g07168 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g16174 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g46298 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g51145 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e017088_P001 | HDG1, HD-GL2-1,... | transcription factor (HD-ZIP IV) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e034755_P001 | HDG1, HD-GL2-1,... | transcription factor (HD-ZIP IV) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No external refs found! |