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  5. Dac_g02365

Dac_g02365 (SIZ1, ATSIZ1)


Aliases : SIZ1, ATSIZ1

Description : E3 SUMO ubiquitin ligase *(SIZ1) & original description: none


Gene families : OG0002076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g02365

Target Alias Description ECC score Gene Family Method Actions
Als_g16402 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037612 No alias not classified & original description: CDS=304-597 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053893 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g07911 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025151001 SIZ1, ATSIZ1 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Len_g03393 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436942g0020 SIZ1, ATSIZ1 SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
Mp6g08590.1 SIZ1, ATSIZ1 SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
Ppi_g10324 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24449 No alias E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g069160.3.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
Zm00001e027582_P001 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 368 415
No external refs found!