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  5. Dac_g00918

Dac_g00918 (XBAT33)


Aliases : XBAT33

Description : E3 ubiquitin ligase *(XBAT3) & original description: none


Gene families : OG0001806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001806_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g00918

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0467.g072821 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: CDS=935-3001 0.03 OrthoFinder output from all 47 species
Ehy_g09186 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g54860.1 XBAT32, LOC_Os02g54860 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g16727 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04906 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12405 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12015 XBAT33 E3 ubiquitin ligase *(XBAT3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10343 XBAT33 E3 ubiquiTin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15136 XBAT33 E3 ubiquiTin ligase *(XBAT3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036629_P001 XBAT33, Zm00001e036629 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 111 131
IPR002110 Ankyrin_rpt 174 248
IPR002110 Ankyrin_rpt 46 98
No external refs found!