Dac_g00507 (U2AF35B, ATU2AF35B)

Aliases : U2AF35B, ATU2AF35B

Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none

Gene families : OG0001523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001523_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g00507
Cluster	HCCA: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
Als_g15612	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
GSVIVT01033771001	U2AF35B, ATU2AF35B	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder output from all 47 species
Gb_08696	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor complex	0.03	OrthoFinder output from all 47 species
Lfl_g18692	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
MA_17429g0020	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor complex	0.02	OrthoFinder output from all 47 species
Pir_g02167	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
Ppi_g05631	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.04	OrthoFinder output from all 47 species
Solyc10g083640.2.1	U2AF35B,...	small subunit of U2AF pre-RNA splicing auxiliary factor complex	0.02	OrthoFinder output from all 47 species
Tin_g28240	U2AF35B, ATU2AF35B	small subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	150	173
IPR000571	Znf_CCCH	14	38
IPR000504	RRM_dom	83	139

External Links

No external refs found!