LOC_Os07g11280.2


Description : Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana (sp|q8rws8|pp199_arath : 865.0)


Gene families : OG_01_0007624 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007624_tree ,
OG_02_0006946 (LandPlants) Phylogenetic Tree(s): OG_02_0006946_tree ,
OG_03_0006926 (SeedPlants) Phylogenetic Tree(s): OG_03_0006926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g11280.2
Cluster HCCA: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.04 Archaeplastida
AT2G41720 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.07 Archaeplastida
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.04 LandPlants
AT2G41720 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 LandPlants
MA_10429061g0010 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.02 LandPlants
Pp3c2_1940V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.07 LandPlants
AMTR_s00159p00058480 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g41720... 0.02 SeedPlants
AT2G41720 EMB2654 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 SeedPlants
Solyc04g015950.3.1 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.05 SeedPlants
Zm00001e035316_P001 No alias Pentatricopeptide repeat-containing protein At2g41720... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 490 546
IPR002885 Pentatricopeptide_repeat 245 304
IPR002885 Pentatricopeptide_repeat 315 359
IPR002885 Pentatricopeptide_repeat 48 74
IPR002885 Pentatricopeptide_repeat 13 42
IPR002885 Pentatricopeptide_repeat 575 601
IPR002885 Pentatricopeptide_repeat 362 407
IPR002885 Pentatricopeptide_repeat 150 199
IPR002885 Pentatricopeptide_repeat 81 126
IPR002885 Pentatricopeptide_repeat 435 478
No external refs found!